Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891343.1_cds_XP_016446122.1_41010
CDS Infomation

[gene=LOC107771295] [db_xref=GeneID:107771295] [protein=1-aminocyclopropane-1-carboxylate synthase-like] [protein_id=XP_016446122.1] [location=join(11483..11565,13527..13722,13865..13996,14494..14654,15665..16685)] [gbkey=CDS]
Sequence

ATGGTACGGGCACGTGAAGAGAAGGTGTATAGAGGCTCCGGTGAGAAAGTGCGAGAGGTT
GGCCATGGTGGGGCTGAGAAGAGTTTATTGAAATTCAGTAAAGATATGGATTCTGAGAGT
GGGAATTTCAACTCAGTGTTTTTGTCTAAGCTAGCTATTAGTGAAGAACATGGCGAAAAT
TCGCCATATTTTGATGGATGGAAAGCATACGATAACGATCCTTTCCACCTTGTGAAAAAT
CCCAATGGTGTTATCCAAATGGGCCTTGCTGAAAATCAGCTTTCTTTTGACTTGATAGAA
GAGTGGATTAAGAGAAATCCAAAAGCTTCCATTTGCACAACTGAAGGAATCAAATCTTTT
AGGAACATTGCTAACTTCCAAGATTATCATGGCTTGCCAGAATTCAGAAGTGCAATTGCG
AAGTTTATGGAAAAAACAAGAAGGGGTAGAGTTAAGTTTGATACAGAGCGTGTAGTAATG
GCTGGTGGAGCTACTGGAGCTAACGAGACTCTTATATTTTGTTTGGCTGATCCAGGCGAT
GCATTTTTAGTCCCCTCGCCTTATTACCCTGGATTCAATAGGGACCTAAGGTGGAGAACT
GGGGTACAACTCCTCCCAATTCCTTGCTATAGCTCCAACAATTTCAAGATTACTACAGAA
GCTGTCAAAGAAACATATGAAAAAGCCCAACAATCAAATATCAAAGTCAAAGGCTTAATC
TTAACCAATCCTTCAAATCCATTAGGCACAACTTTAGACAAAGACACACTAAAAAACCTC
TTAACATTCACAAACAAACACAACATCCACTTAGTTTGCGACGAAATCTACGCAGCCACT
GTCTTTGATTCTCCAGAATTCGTCAGCATTGCTGAAATTATCAACGACGAAATGGATAAA
ATGGATGAATGTATTAATAAAGATTTGGTTCATATAGTGTATAGTCTTTCAAAAGACATG
GGATTTCCAGGATTCAGAGTTGGAATTATCTATTCTTTCAACAATGATGTGGTAAGTTGT
GCTAGAAAAATGTCGAGTTTTAGTCTTGTTACAACTCAGACACAACATTTACTAGCTACT
ATGTTGTCTGACGATGAATTCGTCGACAAATTTCTCGTTGAAAGTTCAAAGAGGTTGCGA
AAAAGGCACAAAAAATTCACAACAGGACTTGAAGAAGTTGGAATAAATTGCTTAAAAGGA
AATGCTGGACTTTACTGTTGGATGGATTTAAGGCCACTGTTGAAAAAACCAACATTTGAT
TCTGAAATGATATTATGGAAATTGATTATAAATGATGTGAAGCTTAATGTTTCACCTGGA
TCTTCTTTTAACTGTCCTGAACCAGGTTGGTTTCGGGTTTGTTTCGCAAATATTGATGAT
CAAACGGTGGAGATTGCACTTGGAAGAATTCAAATGTTAGTGGAAAATGGAGCAAAGAAC
AAGCAGCAATGGAAAAGGAACAATCTACGGCTAAGTTTCTCGAATAGAAAGTACGATGAA
AATGTAATGTCGTCAAGAATGAATATGAATATGATGTCTCCTCATTCCCCTATTAATATT
CCTAAGTCACCACTTGTTCGAGCTAGGACTTAG

Peptide Sequence

PEP ID

XP_016446122.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Nicotiana tabacum]
Sequence

MVRAREEKVYRGSGEKVREVGHGGAEKSLLKFSKDMDSESGNFNSVFLSKLAISEEHGEN
SPYFDGWKAYDNDPFHLVKNPNGVIQMGLAENQLSFDLIEEWIKRNPKASICTTEGIKSF
RNIANFQDYHGLPEFRSAIAKFMEKTRRGRVKFDTERVVMAGGATGANETLIFCLADPGD
AFLVPSPYYPGFNRDLRWRTGVQLLPIPCYSSNNFKITTEAVKETYEKAQQSNIKVKGLI
LTNPSNPLGTTLDKDTLKNLLTFTNKHNIHLVCDEIYAATVFDSPEFVSIAEIINDEMDK
MDECINKDLVHIVYSLSKDMGFPGFRVGIIYSFNNDVVSCARKMSSFSLVTTQTQHLLAT
MLSDDEFVDKFLVESSKRLRKRHKKFTTGLEEVGINCLKGNAGLYCWMDLRPLLKKPTFD
SEMILWKLIINDVKLNVSPGSSFNCPEPGWFRVCFANIDDQTVEIALGRIQMLVENGAKN
KQQWKRNNLRLSFSNRKYDENVMSSRMNMNMMSPHSPINIPKSPLVRART

Transcript Sequence

Gene sequence data has not been registered.